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Journal Articles

Three-Dimensional, Right Ventricular Surface Strain Computation From Three-Dimensional Echocardiographic Images From Patients With Pediatric Pulmonary Hypertension

Priyamvada Kundu, Michal Schäfer, Lisa Le, Thomas Thomas, Pei-Ni Jone, Kendall S. Hunter
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. November 2023, 145(11): 111011.
Paper No: BIO-23-1051
https://doi.org/10.1115/1.4063121
Published Online: September 4, 2023
View Article titled, Three-Dimensional, Right Ventricular Surface Strain Computation From Three-Dimensional Echocardiographic Images From Patients With Pediatric Pulmonary Hypertension
Open the PDF for Three-Dimensional, Right Ventricular Surface Strain Computation From Three-Dimensional Echocardiographic Images From Patients With Pediatric Pulmonary Hypertension in another window
Topics: Computation, Deformation, Diseases, Displacement, Echocardiography, Echoes, Pediatrics, Shear (Mechanics), Fibers, Computer software
Includes: Supplementary data
Journal Articles

Framework Development for Patient-Specific Compliant Aortic Dissection Phantom Model Fabrication: Magnetic Resonance Imaging Validation and Deep-Learning Segmentation

Arian Aghilinejad, Heng Wei, Coskun Bilgi, Alberto Paredes, Alexander DiBartolomeo, Gregory A. Magee, Niema M. Pahlevan
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. September 2023, 145(9): 091010.
Paper No: BIO-23-1040
https://doi.org/10.1115/1.4062539
Published Online: June 13, 2023
View Article titled, Framework Development for Patient-Specific Compliant Aortic Dissection Phantom Model Fabrication: Magnetic Resonance Imaging Validation and Deep-Learning Segmentation
Open the PDF for Framework Development for Patient-Specific Compliant Aortic Dissection Phantom Model Fabrication: Magnetic Resonance Imaging Validation and Deep-Learning Segmentation in another window
Topics: Image segmentation, Magnetic resonance imaging, Phantoms, Manufacturing
Includes: Supplementary data
Journal Articles

Dynamic Deformation Calculation of Articular Cartilage and Cells Using Resonance-Driven Laser Scanning Microscopy

Scott C. Sibole, Eng Kuan Moo, Salvatore Federico, Walter Herzog
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. February 2023, 145(2): 021005.
Paper No: BIO-22-1117
https://doi.org/10.1115/1.4055308
Published Online: October 6, 2022
View Article titled, Dynamic Deformation Calculation of Articular Cartilage and Cells Using Resonance-Driven Laser Scanning Microscopy
Open the PDF for Dynamic Deformation Calculation of Articular Cartilage and Cells Using Resonance-Driven Laser Scanning Microscopy in another window
Topics: Biological tissues, Cartilage, Chondrocytes, Deformation, Image registration, Image segmentation, Resonance, Osmosis, Computer software, Imaging
Journal Articles

A New Method for Quantifying Abdominal Aortic Wall Shear Stress Using Phase Contrast Magnetic Resonance Imaging and the Womersley Solution

Elizabeth Iffrig, Lucas H. Timmins, Retta El Sayed, W. Robert Taylor, John N. Oshinski
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. September 2022, 144(9): 091011.
Paper No: BIO-21-1378
https://doi.org/10.1115/1.4054236
Published Online: April 19, 2022
View Article titled, A New Method for Quantifying Abdominal Aortic Wall Shear Stress Using Phase Contrast Magnetic Resonance Imaging and the Womersley Solution
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Topics: Computational fluid dynamics, Flow (Dynamics), Magnetic resonance imaging, Shear stress, Vessels, Image segmentation
Journal Articles

Morphological Analysis of the Right Ventricular Endocardial Wall in Pulmonary Hypertension

Alifer Bordones-Crom, Sourav S. Patnaik, Prahlad G. Menon, Srinivas Murali, Ender Finol
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Technical Briefs
J Biomech Eng. July 2021, 143(7): 074504.
Paper No: BIO-20-1292
https://doi.org/10.1115/1.4050457
Published Online: April 2, 2021
View Article titled, Morphological Analysis of the Right Ventricular Endocardial Wall in Pulmonary Hypertension
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Topics: Shapes, Statistical analysis, Pressure, Geometry, Diseases, Cardiac cycle, Pulmonary artery, Image segmentation
Journal Articles

Automating Model Generation for Image-Based Cardiac Flow Simulation

Fanwei Kong, Shawn C. Shadden
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. November 2020, 142(11): 111011.
Paper No: BIO-20-1172
https://doi.org/10.1115/1.4048032
Published Online: September 11, 2020
View Article titled, Automating Model Generation for Image-Based Cardiac Flow Simulation
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Topics: Computational fluid dynamics, Image segmentation, Simulation, Geometry, Artificial neural networks
Journal Articles

In Vivo Characterization of the Swine Airway Morphometry and Motion Based on Computed Tomographic Imaging During Respiration

Meryll Grace B. Castro, Nicole A. Varble, Rex C. Yung, Bradford J. Wood, John W. Karanian, William F. Pritchard
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. December 2020, 142(12): 121009.
Paper No: BIO-20-1040
https://doi.org/10.1115/1.4047550
Published Online: September 8, 2020
View Article titled, In Vivo Characterization of the Swine Airway Morphometry and Motion Based on Computed Tomographic Imaging During Respiration
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Topics: Bifurcation, Deformation, Imaging, Lung, Image segmentation, Dynamics (Mechanics)
Journal Articles

Clinical Contrast-Enhanced Computed Tomography With Semi-Automatic Segmentation Provides Feasible Input for Computational Models of the Knee Joint

Katariina A. H. Myller, Rami K. Korhonen, Juha Töyräs, Petri Tanska, Sami P. Väänänen, Jukka S. Jurvelin, Simo Saarakkala, Mika E. Mononen
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. May 2020, 142(5): 051001.
Paper No: BIO-18-1547
https://doi.org/10.1115/1.4045279
Published Online: January 17, 2020
View Article titled, Clinical Contrast-Enhanced Computed Tomography With Semi-Automatic Segmentation Provides Feasible Input for Computational Models of the Knee Joint
Open the PDF for Clinical Contrast-Enhanced Computed Tomography With Semi-Automatic Segmentation Provides Feasible Input for Computational Models of the Knee Joint in another window
Topics: Cartilage, Image segmentation, Knee, Stress, Computer simulation, Modeling, Computerized tomography
Includes: Supplementary data
Journal Articles

Construction of Analysis-Suitable Vascular Models Using Axis-Aligned Polycubes

Adam R. Updegrove, Shawn C. Shadden, Nathan M. Wilson
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. June 2019, 141(6): 060906.
Paper No: BIO-18-1142
https://doi.org/10.1115/1.4040773
Published Online: April 22, 2019
View Article titled, Construction of Analysis-Suitable Vascular Models Using Axis-Aligned Polycubes
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Topics: Algorithms, Bifurcation, B-splines, Construction, Geometry, Modeling, Biomedical imaging, Image segmentation, Blood flow, Cardiovascular system
Journal Articles

In Vivo Quantification of Regional Circumferential Green Strain in the Thoracic and Abdominal Aorta by Two-Dimensional Spiral Cine DENSE MRI

John S. Wilson, Xiaodong Zhong, Jackson Hair, W. Robert Taylor, John N. Oshinski
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. June 2019, 141(6): 060901.
Paper No: BIO-17-1442
https://doi.org/10.1115/1.4040910
Published Online: April 22, 2019
View Article titled, In Vivo Quantification of Regional Circumferential Green Strain in the Thoracic and Abdominal Aorta by Two-Dimensional Spiral Cine DENSE MRI
Open the PDF for In Vivo Quantification of Regional Circumferential Green Strain in the Thoracic and Abdominal Aorta by Two-Dimensional Spiral Cine DENSE MRI in another window
Topics: Aorta, Displacement, Imaging, Magnetic resonance imaging, Noise control, Image segmentation, Kinematics
Includes: Supplementary data
Journal Articles

A Re-Engineered Software Interface and Workflow for the Open-Source SimVascular Cardiovascular Modeling Package

Hongzhi Lan, Adam Updegrove, Nathan M. Wilson, Gabriel D. Maher, Shawn C. Shadden, Alison L. Marsden
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Technical Briefs
J Biomech Eng. February 2018, 140(2): 024501.
Paper No: BIO-17-1574
https://doi.org/10.1115/1.4038751
Published Online: January 25, 2018
View Article titled, A Re-Engineered Software Interface and Workflow for the Open-Source SimVascular Cardiovascular Modeling Package
Open the PDF for A Re-Engineered Software Interface and Workflow for the Open-Source SimVascular Cardiovascular Modeling Package in another window
Topics: Cardiovascular system, Computer software, Graphical user interfaces, Image segmentation, Modeling, Simulation, Vessels, Pipelines, Visualization, Boundary-value problems
Journal Articles

Influence of Scan Resolution, Thresholding, and Reconstruction Algorithm on Computed Tomography-Based Kinematic Measurements

Christopher John Tan, William C. H. Parr, William R. Walsh, Mariano Makara, Kenneth A. Johnson
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Technical Briefs
J Biomech Eng. October 2017, 139(10): 104503.
Paper No: BIO-16-1436
https://doi.org/10.1115/1.4037558
Published Online: August 23, 2017
View Article titled, Influence of Scan Resolution, Thresholding, and Reconstruction Algorithm on Computed Tomography-Based Kinematic Measurements
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Topics: Algorithms, Bone, Kinematics, Resolution (Optics), Errors, Image segmentation, Bricks
Journal Articles

Discussion: “Comparison of Statistical Methods for Assessing Spatial Correlations Between Maps of Different Arterial Properties” (Rowland, E. M., Mohamied, Y., Chooi, K. Y., Bailey, E. L., and Weinberg, P. D., 2015, ASME J. Biomech. Eng., 137(10), p. 101003 ): An Alternative Approach Using Segmentation Based on Local Hemodynamics

Heather A. Himburg, Deborah M. Grzybowski, Andrew L. Hazel, Jeffrey A. LaMack, Morton H. Friedman
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Discussions
J Biomech Eng. September 2016, 138(9): 095501.
Paper No: BIO-16-1115
https://doi.org/10.1115/1.4034217
Published Online: August 3, 2016
View Article titled, Discussion: “Comparison of Statistical Methods for Assessing Spatial Correlations Between Maps of Different Arterial Properties” (Rowland, E. M., Mohamied, Y., Chooi, K. Y., Bailey, E. L., and Weinberg, P. D., 2015, ASME J. Biomech. Eng., 137(10), p. 101003 ): An Alternative Approach Using Segmentation Based on Local Hemodynamics
Open the PDF for Discussion: “Comparison of Statistical Methods for Assessing Spatial Correlations Between Maps of Different Arterial Properties” (Rowland, E. M., Mohamied, Y., Chooi, K. Y., Bailey, E. L., and Weinberg, P. D., 2015, ASME J. Biomech. Eng., 137(10), p. 101003 ): An Alternative Approach Using Segmentation Based on Local Hemodynamics in another window
Topics: Hemodynamics, Image segmentation, Permeability, Shear (Mechanics)
Journal Articles

Voxelized Model of Brain Infusion That Accounts for Small Feature Fissures: Comparison With Magnetic Resonance Tracer Studies

Wei Dai, Garrett W. Astary, Aditya K. Kasinadhuni, Paul R. Carney, Thomas H. Mareci, Malisa Sarntinoranont
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. May 2016, 138(5): 051007.
Paper No: BIO-15-1047
https://doi.org/10.1115/1.4032626
Published Online: March 30, 2016
View Article titled, Voxelized Model of Brain Infusion That Accounts for Small Feature Fissures: Comparison With Magnetic Resonance Tracer Studies
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Topics: Biological tissues, Brain, Image segmentation, Magnetic resonance imaging, Simulation, Fluids, Space, Flow (Dynamics)
Journal Articles

The Influence of Inaccuracies in Carotid MRI Segmentation on Atherosclerotic Plaque Stress Computations

Harm A. Nieuwstadt, Lambert Speelman, Marcel Breeuwer, Aad van der Lugt, Anton F. W. van der Steen, Jolanda J. Wentzel, Frank J. H. Gijsen
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. February 2014, 136(2): 021015.
Paper No: BIO-13-1369
https://doi.org/10.1115/1.4026178
Published Online: February 5, 2014
View Article titled, The Influence of Inaccuracies in Carotid MRI Segmentation on Atherosclerotic Plaque Stress Computations
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Topics: Finite element analysis, Magnetic resonance imaging, Stress, Image segmentation
Journal Articles

Development of a Hip Joint Model for Finite Volume Simulations

P. Cardiff, A. Karač, D. FitzPatrick, R. Flavin, A. Ivanković
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. January 2014, 136(1): 011006.
Paper No: BIO-13-1075
https://doi.org/10.1115/1.4025776
Published Online: December 3, 2013
View Article titled, Development of a Hip Joint Model for Finite Volume Simulations
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Topics: Bone, Cartilage, Computer software, Gait analysis, Simulation, Stress, Geometry, Pressure, Cycles, Magnetic resonance imaging
Journal Articles

Quantifying Dynamic Characteristics of Human Walking for Comprehensive Gait Cycle

Carlotta Mummolo, Luigi Mangialardi, Joo H. Kim
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. September 2013, 135(9): 091006.
Paper No: BIO-12-1573
https://doi.org/10.1115/1.4024755
Published Online: July 10, 2013
View Article titled, Quantifying Dynamic Characteristics of Human Walking for Comprehensive Gait Cycle
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Topics: Cycles, Image segmentation, Dimensions, Inertia (Mechanics)
Journal Articles

Estimated in Vivo Postnatal Surface Growth Patterns of the Ovine Main Pulmonary Artery and Ascending Aorta

Bahar Fata, Danielle Gottlieb, John E. Mayer, Michael S. Sacks
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. July 2013, 135(7): 071010.
Paper No: BIO-12-1635
https://doi.org/10.1115/1.4024619
Published Online: June 11, 2013
View Article titled, Estimated in Vivo Postnatal Surface Growth Patterns of the Ovine Main Pulmonary Artery and Ascending Aorta
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Topics: Aorta, Deformation, Finite element analysis, Geometry, Pulmonary artery, Shapes, Surface deformation, Biological tissues, Image segmentation, Imaging
Journal Articles

Considerations for Numerical Modeling of the Pulmonary Circulation—A Review With a Focus on Pulmonary Hypertension

V. O. Kheyfets, W. O'Dell, T. Smith, J. J. Reilly, E. A. Finol
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Research-Article
J Biomech Eng. June 2013, 135(6): 061011.
Paper No: BIO-12-1598
https://doi.org/10.1115/1.4024141
Published Online: May 9, 2013
View Article titled, Considerations for Numerical Modeling of the Pulmonary Circulation—A Review With a Focus on Pulmonary Hypertension
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Topics: Boundary-value problems, Diseases, Flow (Dynamics), Hemodynamics, Outflow, Pressure, Vessels, Physiology, Simulation, Image segmentation
Journal Articles

Accuracy of Individual Trabecula Segmentation Based Plate and Rod Finite Element Models in Idealized Trabecular Bone Microstructure

Hong Wang, X. Sherry Liu, Bin Zhou, Ji Wang, Baohua Ji, Yonggang Huang, Keh-Chih Hwang, X. Edward Guo
Journal: Journal of Biomechanical Engineering
Publisher: ASME
Article Type: Technical Briefs
J Biomech Eng. April 2013, 135(4): 044502.
Paper No: BIO-12-1393
https://doi.org/10.1115/1.4023983
Published Online: April 5, 2013
View Article titled, Accuracy of Individual Trabecula Segmentation Based Plate and Rod Finite Element Models in Idealized Trabecular Bone Microstructure
Open the PDF for Accuracy of Individual Trabecula Segmentation Based Plate and Rod Finite Element Models in Idealized Trabecular Bone Microstructure in another window
Topics: Bone, Finite element analysis, Finite element model, Image segmentation, Yield strength, Young's modulus, Resolution (Optics), Rods, Plates (structures), Mechanical properties